PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00007.1.g01100.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 161aa    MW: 17613.1 Da    PI: 9.441
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00007.1.g01100.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.11.6e-071201392645
                         G2-like  26 kAtPktilelmkvkgLtleh 45 
                                     kAtPk+i ++mkvkgLt++h
  Zjn_sc00007.1.g01100.1.sm.mkhc 120 KATPKAIQRVMKVKGLTIYH 139
                                     8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF111078.3E-1411103No hitNo description
Gene3DG3DSA:1.10.10.601.7E-5119140IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MGWAHATVAL EELLGLVRGF VDILVLAGGR TSSGAAATWS CGEVKNALRW ALFFEEVFKN  60
LRDSGQYEDS ASELDAALVE LTSSQDFPKG LAGMRSDTLS SARDIDARKF NTSKLFLLPK  120
ATPKAIQRVM KVKGLTIYHK YRAIQYRPES SDDPKKAAVA S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954343.11e-53PREDICTED: uncharacterized protein LOC101763564 isoform X1
RefseqXP_004954345.14e-54PREDICTED: uncharacterized protein LOC101763564 isoform X2
TrEMBLK3YSD52e-53K3YSD5_SETIT; Uncharacterized protein
STRINGSi017179m4e-53(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54942526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.14e-08phosphate starvation response 1